Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857400.1_cds_XP_016513428.1_25973
CDS Infomation

[gene=LOC107830397] [db_xref=GeneID:107830397] [protein=transcription factor bHLH49-like] [protein_id=XP_016513428.1] [location=join(27684..28475,28553..28762,28848..28913,29018..29086,29449..29520,29617..29805,29977..30064,30146..30183)] [gbkey=CDS]
Sequence

ATGGATATAGCTAGCAACAATGATAGTGAACCAGAAAAGAGGAATAATGAAGAAGTTATG
AACTATCAGTCACCAAATGTTTCCTCAGAATGGCAATTAAGTGGGAGCAATTTGACTAAT
GTATCTATGGGGATGATTCAAAGTAACAATCAAATGGTTGATTCATTTTGCCCTACTTCT
TGGGATCAGCCTACCAATTCGCCGAGCTTAGGCTTTTGTGATGCTAATGTTCAAATAAAT
CCTAGCACTTCAAATCCATTGGTGACACTCGGTTCTAATTGGACTCCAAATGCAATGTTG
AAAGGGGGAATGTTTTTACCTCCTGCTCCTATGATGCTCCCTCAAAGCTTAGCTCAGTTT
CTGGCTGATTCGGGTTTTATTGAAAGAGCTGCAAGGTTTTCTTGCTTTAGTGGGGGGAAC
TTTGGTGACATGATGAACCCTTTTAGCTTGCCCGAGTCGATGAATCCTTACTACAGGGGA
CCCCCACCAATGCAGGGTCCTCAAGAGGTTTTAGCAAGTAATGGGTTGAAATCACCTTCT
GCTCAGAAGCAGCATTTGAGTAATGTGGCTGAAAGTTCCAAGGATGTTTCTTTAACTGTT
GACCATAGGGGCACAGAAAGAAGCCCCCTCAAAAATGAGAAGAAGAGTGAAAATTTTGAT
GAAGTAGCTGCAGTCTCTGGTAATGAGTCTGGTGAGGCCGAATGTAGCGGCCGTCAAGAA
GAGATGGATGGTGCAGGTGAGGAGTCTTATGGAAAGAACATTGGCTCAAAGAAAAGGAAA
AGAGGTGGTAAGGATACTGAACCACAGCAGCCACTGGCTGAATCTGGTAAGGATCAAATT
GAAATTCAGAAAGGGGAACAAAACTTGAATTCAGTTACCGGCAAGTCCGGCGGAAAGAAT
GTTAAACAGGGGTCTCAAGCGTCAGATCCAACAAAAGAAGATTACATACATGTTCGAGCT
CGAAGAGGCCAGGCAACAAATAGCCATAGTCTTGCAGAAAGAATAAGGCGGGAGAAAATT
AGCGAACGGATGAAGTTTCTTCAGGATCTTGTACCTGGTTGCAACAAGGTCACGGGCAAA
GCTGTAATGCTGGATGAAATCATTAACTATGTACAGTCTCTGCAAAGGCAGGTTGAGTTC
CTCTCAATGAAGCTTGCAACAGTAAACCCACAGCTTGATTTTAATATTGATGGGCTCCTG
GCCAAAAATATCCTCCAGTCTCGAGCAGGTCCTTCATCTTCGTTCGCTTTTCCACCTGAT
ATGACCATGCAGTATCCTCCCTTACATCCACCACAGCCTGGTTATGGAATTCCTAGTGAT
GCATTTCGTAGAGCTATCACTCCCCATTTAGCTGCTACTAGTGGTGGGCCTAGTGAATAC
AAGGATCCTTCATCTGAGGGACCGAGTGTATGGGATAATGAGCTACATAATATTGTTCAA
ATGGGGTTAAATTCAAGTATACCTCTATCTAGTGAAGATTTAAGTGGTTCTTTGCCAGCA
TGCCAGATGAAAGCAGAACCTTGA

Peptide Sequence

PEP ID

XP_016513428.1
PEP Infomation

PREDICTED: transcription factor bHLH49-like [Nicotiana tabacum]
Sequence

MDIASNNDSEPEKRNNEEVMNYQSPNVSSEWQLSGSNLTNVSMGMIQSNNQMVDSFCPTS
WDQPTNSPSLGFCDANVQINPSTSNPLVTLGSNWTPNAMLKGGMFLPPAPMMLPQSLAQF
LADSGFIERAARFSCFSGGNFGDMMNPFSLPESMNPYYRGPPPMQGPQEVLASNGLKSPS
AQKQHLSNVAESSKDVSLTVDHRGTERSPLKNEKKSENFDEVAAVSGNESGEAECSGRQE
EMDGAGEESYGKNIGSKKRKRGGKDTEPQQPLAESGKDQIEIQKGEQNLNSVTGKSGGKN
VKQGSQASDPTKEDYIHVRARRGQATNSHSLAERIRREKISERMKFLQDLVPGCNKVTGK
AVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNIDGLLAKNILQSRAGPSSSFAFPPD
MTMQYPPLHPPQPGYGIPSDAFRRAITPHLAATSGGPSEYKDPSSEGPSVWDNELHNIVQ
MGLNSSIPLSSEDLSGSLPACQMKAEP

Transcript Sequence

Gene sequence data has not been registered.